G-Day, Episode I
Thanks to all who emailed me about the New York Times article. Amy Harmon did her usual stellar job. And in case you’re wondering: yes, skin biopsies hurt.
I have to say, this whole extravaganza felt more like a walk-through or a dress rehearsal. Several of us did not get our sequence data yesterday and those who did got very rough, low-coverage data. So besides the fact that assembling the ten of us is like herding cats, what was the point? I think there were two: First, to demonstrate that the PGP is indeed a community. While personal genomics is finally about the individual, if we are ever to to destigmatize this information, then I think it’s critical that we start to move away from the Venter and Watson “me me me” models. There are now 5000 people in the queue to be PGP participants. Which brings me to the second point: even though we are hardly the first to make our SNP data public, my hope is that our collective example might nudge still more folks in that direction.
A note on my still-to-come sequence data: As loudly as I’ve agitated for public release of genomic data on this blog, I have reserved the right to redact any or all of my sequence data and my Coriell EBV-transformed cell line. I am alone among the PGP-10 in doing this and I feel a little sheepish about it, but I am unapologetic. I have two young daughters. Yes, genomic information is probabilistic information and my genome is not theirs. But I have what I imagine every other loving father has: a fierce instinct to protect his children. If I carry a known mutation in a highly penetrant mendelian disorder, I want them to find that out from me and my wife, not from the internet or from some precocious classmate.
My public profile is here. I am bracing myself for the SSRI spam.
My SNP and sequence data will eventually be there as well. My SNP data will appear are on SNPedia very soon now.
I work as an Assistant Professor in the Duke University Institute for Genome Sciences & Policy (although this site and its content are my own).
In 2007 I became the fourth subject in Harvard geneticist George Church's Personal Genome Project. As the PGP moves forward, I am chronicling the dawn of personal genomics, that is, people obtaining their genomic information for whatever reason(s) and figuring out what to do with it. I am interested in the relevant technologies and especially the attendant privacy and other ethical/legal/social issues.
This blog may also discuss some of my non-genome interests or, to paraphrase Dwight Yoakam, "Guitars, Cadillacs, hillbilly music, etc etc."
The header image comes from the Liz Lerman Dance Exchange's multimedia performance piece, "Ferocious Beauty: Genome."
October 21st, 2008 at 4:32 pm
You’ve been added to
http://www.snpedia.com/index.php/User:Misha_Angrist
Your Affy6.0 Report is at
http://www.snpedia.com/files/promethease/outputs/genome_Misha_Angrist_Navigenics.html
Your Affy5.0 Report is at
http://www.snpedia.com/files/promethease/outputs/pgp-promethease-angrist.html
Thank you for sharing this with us.
October 22nd, 2008 at 12:14 pm
[…] on Monday the 20th to review the results of their genetic sequencing. For more information, see a blog post by participant Misha Angrist, and Jason Bobe has a great round-up of articles at “Press […]
October 24th, 2008 at 10:21 pm
Misha is right about his daughters. That’s not for the Internet to decide.
October 25th, 2008 at 12:25 am
Are you homozygous for the Skyline Chili gene?
October 25th, 2008 at 1:07 am
I haVe a CNV for that, I’m afraid, which is why my total cholesterol is now 239.